GWAS-related eQTLs across different cancer types
We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).
|
Cancer type
|
eQTL type
|
tagSNP
|
Gene position (hg19)
|
p-value
|
|||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| UCEC | cis | rs9815354 | 1 | rs9847006 | chr3:41755359 | ULK4 | chr3:41288091-42003660:- | 0.52 | 6.34 | 2.55E-9 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs9847975 | chr3:41786904 | ULK4 | chr3:41288091-42003660:- | 0.44 | 4.48 | 1.45E-5 | Diastolic blood pressure |
| UCEC | cis | rs10935120 | 1 | rs9850015 | chr3:134269541 | ANAPC13 | chr3:134196547-134204865:- | 0.4 | 4.65 | 7.29E-6 | Height |
| UCEC | cis | rs9815354 | 1 | rs9852303 | chr3:41759525 | ULK4 | chr3:41288091-42003660:- | 0.51 | 6.28 | 3.36E-9 | Diastolic blood pressure |
| UCEC | cis | rs10935120 | 1 | rs9854299 | chr3:134206728 | ANAPC13 | chr3:134196547-134204865:- | 0.39 | 4.47 | 1.5E-5 | Height |
| UCEC | cis | rs9815354 | 1 | rs9854838 | chr3:41805670 | ULK4 | chr3:41288091-42003660:- | 0.54 | 6.38 | 1.99E-9 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs9855965 | chr3:41860508 | ULK4 | chr3:41288091-42003660:- | 0.45 | 5.21 | 6.03E-7 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs9856088 | chr3:41860482 | ULK4 | chr3:41288091-42003660:- | 0.45 | 5.21 | 6.03E-7 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs9856633 | chr3:42013850 | ULK4 | chr3:41288091-42003660:- | 0.52 | 6.25 | 3.85E-9 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs9857175 | chr3:41822054 | ULK4 | chr3:41288091-42003660:- | 0.5 | 5.78 | 4.12E-8 | Diastolic blood pressure |
| UCEC | cis | rs10935120 | 1 | rs9863786 | chr3:134247203 | ANAPC13 | chr3:134196547-134204865:- | 0.4 | 4.57 | 9.85E-6 | Height |
| UCEC | cis | rs9815354 | 1 | rs9863915 | chr3:41762002 | ULK4 | chr3:41288091-42003660:- | 0.51 | 6.28 | 3.36E-9 | Diastolic blood pressure |
| UCEC | cis | rs10935120 | 1 | rs9864346 | chr3:134312352 | ANAPC13 | chr3:134196547-134204865:- | 0.39 | 4.39 | 2.1E-5 | Height |
| UCEC | cis | rs9815354 | 1 | rs9865127 | chr3:41807448 | ULK4 | chr3:41288091-42003660:- | 0.53 | 6.3 | 2.98E-9 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs9865780 | chr3:41895802 | ULK4 | chr3:41288091-42003660:- | 0.52 | 6.25 | 3.94E-9 | Diastolic blood pressure |